1.- ACCases
1a.- Homomeric acetyl-CoA carboxylase
(EC 6.4.1.2)
Last update, nr data base: 8-28-99
Last update, dbEST data base: 8-13-99
Last update, Stanford data base: 8-15-99
|
Plant species |
type of sequence |
accession number |
EST clone ID/gene ID in BAC |
|
A. thaliana |
D c |
ACC1 |
|
|
A. thaliana |
G p |
ACC2 |
|
|
A. thaliana |
G c |
ACC1 |
|
|
A. thaliana |
BAC |
ACC1 |
|
|
A.
thaliana |
GSS |
ACC1 |
|
|
A.
thaliana |
GSS |
ACC1 |
|
|
A.
thaliana |
GSS |
ACC1 |
|
|
A.
thaliana |
GSS |
ACC1 |
|
|
A.
thaliana |
GSS |
ACC1 |
|
|
A.
thaliana |
GSS |
ACC1 |
|
|
A.
thaliana |
GSS |
ACC1 |
|
|
A.
thaliana |
GSS |
ACC1 |
|
|
A.
thaliana |
GSS |
ACC1 |
|
|
A.
thaliana |
GSS |
ACC1 |
|
|
A.
thaliana |
GSS |
ACC1 |
|
|
A.
thaliana |
GSS |
ACC1 |
|
|
A. thaliana |
G p |
ACC1* |
|
|
A. thaliana |
G p |
ACC1* |
|
|
A. thaliana |
G p |
ACC1* |
|
|
A. thaliana |
G p |
ACC1* |
|
|
A. thaliana |
G p |
ACC1* |
|
|
A. thaliana |
G p |
ACC1* |
|
|
A. thaliana |
G p |
ACC1* |
|
|
A.
thaliana |
G
p |
ACC1* |
|
|
A. thaliana |
G p |
ACC1* |
|
|
A. thaliana |
G p |
ACC1* |
|
|
A. thaliana |
G p |
ACC1* |
|
|
A. thaliana |
G p |
ACC1* |
|
|
A. thaliana |
G p |
ACC1* |
|
|
A. thaliana |
G p |
ACC1* |
|
|
A. thaliana |
G p |
ACC1* |
|
|
A. thaliana |
G p |
ACC1 |
|
|
A.
thaliana |
GSS |
ACC2 |
|
|
A.
thaliana |
GSS |
possibly,
ACC2 |
|
|
A.
thaliana |
GSS |
possibly,
ACC2 |
|
|
A.
thaliana |
GSS |
possibly,
ACC2 |
|
|
A.
thaliana |
GSS |
possibly,
ACC2 |
|
|
A. thaliana |
EST |
193N22T7 |
|
|
A. thaliana |
EST |
G1E3T7 |
|
|
A. thaliana |
EST |
156K18T7 |
|
|
A. thaliana |
EST |
60C1T7 |
|
|
A.sativa |
G c |
|
|
|
B. napus |
G c |
|
|
|
B. napus |
G p |
|
|
|
B. napus |
G p |
|
|
|
B. napus |
D p |
|
|
|
B. napus |
D p |
|
|
|
B. napus |
EST |
|
|
|
C. sinensis |
D p |
|
|
|
G. max |
G c |
|
|
|
G. max |
G p |
|
|
|
G. max |
D p |
|
|
|
G.
max |
EST |
|
|
|
H. vulgare |
D p |
|
|
|
M. polymorpha |
EST |
|
|
|
M. sativa |
D c |
|
|
|
O. sativa |
EST |
R1911_1A |
|
|
O. sativa |
EST |
S10652_2A |
|
|
O. sativa |
EST |
R1958_1A |
|
|
O. sativa |
EST |
R2445_1A |
|
|
P. vulgaris |
D p |
|
|
|
P.
taeda |
EST |
|
|
|
T. aestivum |
D c |
|
|
|
T. aestivum |
D c |
|
|
|
T. aestivum |
D c |
|
|
|
T. aestivum |
D c |
|
|
|
T. aestivum |
G c |
|
|
|
T. aestivum |
D p |
|
|
|
Z. mays |
D c |
|
|
|
Z. mays |
D p |
|
|
|
Z. mays |
D p |
|
|
|
Z. mays |
D p |
|
|
|
Z. mays |
D p |
|
|
|
Z. mays |
D p |
|
|
|
Z. mays |
D p |
|
|
|
Z. mays |
D p |
|
|
|
Z. mays |
D p |
|
|
|
Z. mays |
D p |
|
|
|
Z. mays |
D p |
|
|
|
Z. mays |
D p |
|
|
|
Z. mays |
D p |
|
|
|
Z. mays |
D p |
|
|
|
Z. mays |
D p |
|
|
|
Z.
mays |
EST |
|
*sequences
X77375-X77381 and A47138-A47155 belong to one and the
same gene, probably ACC1,
which has been sequenced completely(L27074).
However, there are numerous conflicts between L27074 and
X77375-X77381
and A47138-A47155 probably due to sequencing errors in
X77375-X77381
and A47138-A47155 (see alignments in A47138-A47155)
Possible fungal
contamination in A. thaliana GSI:
|
A.
thaliana |
GSS |
Likely fungal contamination (clone T13G2) |
|
|
A.
thaliana |
GSS |
opposite
end of BAC T13G2 |
Algae:
|
C.
cryptica |
G c |
|
1b.- Heteromeric acetyl-CoA carboxylase
BC subunit (EC 6.4.1.2)
Last update, nr data base: 8-14-99
Last update, dbEST data base: 8-14-99
Last update, Stanford data base: 8-15-99
|
Plant species |
type of sequence |
accession number |
EST clone ID/ gene ID in BAC |
|
A. thaliana |
BAC |
T26D22.8 |
|
|
A. thaliana |
BAC |
T26D22.8 |
|
|
A. thaliana |
GSS |
T26D22.8 |
|
|
A. thaliana |
GSS |
T26D22.8 |
|
|
A. thaliana |
GSS |
T26D22.8 |
|
|
A. thaliana |
G c |
T26D22.8 |
|
|
A. thaliana |
G c |
T26D22.8 |
|
|
A. thaliana |
D c |
T26D22.8 |
|
|
A. thaliana |
EST |
H7D5T7 |
|
|
A. thaliana |
EST |
150M20T7 |
|
|
A. thaliana |
EST |
G7H12T7 |
|
|
A. thaliana |
EST |
VBVXB09 |
|
|
A. thaliana |
EST |
G7E8T7 |
|
|
A. thaliana |
EST |
119H4T7 |
|
|
A. thaliana |
EST |
VBVXB09 |
|
|
B. napus |
EST |
|
|
|
B. napus |
EST |
|
|
|
C. annuum |
EST |
|
|
|
G.
hirsutum |
EST |
|
|
|
G.
hirsutum |
EST |
|
|
|
G.
hirsutum |
EST |
|
|
|
G.
hirsutum |
EST |
|
|
|
G.
hirsutum |
EST |
|
|
|
L.
esculentum |
EST |
|
|
|
L.
esculentum |
EST |
|
|
|
L. esculentum |
EST |
|
|
|
R. communis |
D p |
|
|
|
R. communis |
EST |
|
|
|
G. max |
D p |
|
|
|
G. max |
D c |
|
|
|
G. max |
D c |
|
|
|
N. tabacum |
D c |
|
1c.- Heteromeric acetyl-CoA carboxylase
BCCP subunit (EC 6.4.1.2)
Last update, nr data base: 8-14-99
Last update, dbEST data base: 8-14-99
Last update, Stanford data base: 8-18-99
|
Plant
species |
type
of sequence |
accession number |
EST
clone ID/ gene
ID in BAC |
|
A.
thaliana |
D
c |
|
|
|
A.
thaliana |
G
c |
|
|
|
A.
thaliana |
BAC |
|
|
|
A.
thaliana |
GSS |
|
|
|
A.
thaliana |
EST |
VCVDE11
|
|
|
A.
thaliana |
EST |
294B8T7,
putative |
|
|
A.
thaliana |
EST |
196J2T7,
putative |
|
|
A.
thaliana |
EST |
180M1T7, putative |
|
|
A.
thaliana |
EST |
180N1T7, putative |
|
|
A.
thaliana |
EST |
221F16T7,
putative |
|
|
A.
thaliana |
EST |
115I6T7,
putative |
|
|
A.
thaliana |
EST |
169D5T7,
putative |
|
|
A.
thaliana |
EST |
191L17T7,
putative |
|
|
A.
thaliana |
EST |
97C18T7,
putative |
|
|
B.
napus |
D
p |
|
|
|
B.
napus |
D
p |
|
|
|
B.
napus |
D
p |
|
|
|
B.
napus |
D
c |
|
|
|
B.
napus |
D
p |
|
|
|
B.
napus |
D
p |
|
|
|
C.
annuum |
EST |
|
|
|
G.
max |
D
c |
|
|
|
G.
max |
EST |
|
|
|
G. hirsutum |
EST |
|
|
|
G. hirsutum |
EST |
|
|
|
L. esculentum |
EST |
|
|
|
M. crystallinum |
EST |
|
|
|
Populus
hybrid |
EST |
|
|
|
Populus
hybrid |
EST |
|
algae (encoded in
the chloroplast genome):
|
Algae
species |
type
of sequence |
accession number |
EST
clone ID/ gene
ID in BAC |
|
P.
purpurea |
G(chl)
c |
|
|
|
C.
caldarium |
G(chl)
p |
|
1d.- Heteromeric acetyl-CoA carboxylase
alpha-CT subunit (EC 6.4.1.2)
Last update, nr
data base: 8-6-99
Last update, dbEST
data base: 8-6-99
Last update,
Stanford data base: 8-28-99
|
Plant
species |
type
of sequence |
accession number |
EST
clone ID/ gene
ID in BAC |
|
A.
thaliana |
BAC |
gene
T8P21.5 |
|
|
A.
thaliana |
BAC |
pseudogene
F16M14.19 |
|
|
A.
thaliana |
GSS |
pseudogene
F16M14.19 |
|
|
A.
thaliana |
GSS |
pseudogene
F16M14.19 |
|
|
A.
thaliana |
EST |
115E12XP |
|
|
A.
thaliana |
EST |
G10A4T7 |
|
|
A.
thaliana |
EST |
115E12T7 |
|
|
A.
thaliana |
EST |
H1E11T7 |
|
|
A.
thaliana |
EST |
GBGe16 |
|
|
A.
thaliana |
EST |
GBGe16 |
|
|
B.
napus |
EST |
|
|
|
G.
max |
D
c |
|
|
|
G.
max |
D
c |
|
|
|
L.
esculentum |
EST |
|
|
|
L.
esculentum |
EST |
|
|
|
P.
sativum |
D
c |
|
|
|
Populus
hybrid |
EST |
|
|
|
R.
communis |
EST |
|
|
|
R.
communis |
EST |
|
|
|
R.
communis |
EST |
|
|
|
R.
communis |
EST |
|
|
|
R.
communis |
EST |
|
algae (encoded in
the chloroplast genome):
|
Algae
species |
type
of sequence |
accession number |
EST
clone ID/ gene
ID in BAC |
|
Antithamnion
sp. |
G(chl)
c |
|
|
|
P.
purpurea |
G(chl)
c |
|
|
|
C.
caldarium |
G(chl)
p |
|
1e.- Heteromeric acetyl-CoA carboxylase
beta-CT subunit (EC 6.4.1.2)
Last update, nr
data base: 8-6-99
Last update, dbEST
data base: 8-6-99
Last update,
Stanford data base: 8-6-99
|
Plant
species |
type
of sequence |
accession number |
EST
clone ID/ gene
ID in BAC |
|
A.
formosae |
G(chl)
p |
|
|
|
A.
thaliana |
G(chl)
c |
|
|
|
B.
napus |
G(chl)
c |
|
|
|
C.
reflexa |
G(chl)
c |
|
|
|
E.
virginiana |
G(chl)
c |
|
|
|
G.
max |
G(chl)
c |
|
|
|
G.
arboreum |
G(chl)
p |
|
|
|
G.
barbadense |
G(chl)
p |
|
|
|
G.
darwinii |
G(chl)
p |
|
|
|
G.
hirsutum |
G(chl)
p |
|
|
|
G.
mustelinum |
G(chl)
p |
|
|
|
G.
tomentosum |
G(chl)
p |
|
|
|
F.
capillatum |
G(chl)
p |
|
|
|
F.
capillatum |
G(chl)
p |
|
|
|
F.
cymosum |
G(chl)
p |
|
|
|
F.
cymosum |
G(chl)
p |
|
|
|
F.
cymosum |
G(chl)
p |
|
|
|
F.
cymosum |
G(chl)
p |
|
|
|
F.
cymosum |
G(chl)
p |
|
|
|
F.
esculentum |
G(chl)
p |
|
|
|
F.
esculentum |
G(chl)
p |
|
|
|
F.
gracilipes |
G(chl)
p |
|
|
|
F.
homotropicum |
G(chl)
p |
|
|
|
F.
leptopodum |
G(chl)
p |
|
|
|
F.
lineare |
G(chl)
p |
|
|
|
F.
pleioramosum |
G(chl)
p |
|
|
|
F.
statice |
G(chl)
p |
|
|
|
F.
tataricum potanini |
G(chl)
p |
|
|
|
F.
urophyllum |
G(chl)
p |
|
|
|
F.
urophyllum |
G(chl)
p |
|
|
|
M.
crystallinum |
EST |
|
|
|
M.
polymorpha |
G(chl)
c |
|
|
|
N. olivacea |
G(chl)
c |
|
|
|
N.
tabacum |
G(chl)
c |
|
|
|
P.
hydropiper |
G(chl)
p |
|
|
|
P.
abiens |
G(chl)
c |
|
|
|
P.
abiens |
G(chl)
c |
|
|
|
P.
sativum |
G(chl)
c |
|
|
|
P.
sativum |
G(chl)
c |
|
|
|
P.
sativum |
G(chl)
c |
|
|
|
P.
thunbergii |
G(chl)
c |
|
|
|
P.
cuspidatum |
G(chl)
p |
|
|
|
P.
cuspidatum |
G(chl)
p |
|
|
|
S.
tuberosum |
G(chl)
c |
|
|
|
A.
lygodiifolia |
G(chl)
c |
|
|
|
P.
patens |
G(chl)
c |
|
algae (encoded in
the chloroplast genome):
|
Algae species |
type of sequence |
accession number |
EST clone ID/ gene ID in BAC |
|
C. vulgaris |
G(chl) c |
|
|
|
P. purpurea |
G(chl) c |
|